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Predicting Peptide–Receptor (Breast Cancer Biomarker) Interactions Receptor–peptide complexes were modeled by the PatchDock online docking server ( which makes use of a geometry-based molecular docking algorithm as a scoring function.27 After docking analysis, complexes were additionally refined by using the FireDock online server.28 Molecular Docking Analysis Docking of doxorubicin with tumor biomarkers (receptors) was simulated using Autodock Version 4.2.23,29 Autodock searches for the best conformation of receptor and doxorubicin were on the basis of its binding energy